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Peer Reviewed Publications


145. Y. X. Huang, S. Mahler, M. Dickson, A. Abedi, J. M. Tyszka, Y. T. Lo, J. Russin, C. Liu, and C. Yang, Compact and cost-effective laser-powered speckle contrast optical spectroscopy fiber-free device for measuring cerebral blood flow, J. Biomed. Opt. 29(6), 067001 (2024); PMID: 38826808 PMCID: PMC11140771 doi:10.1117/1.JBO.29.6.067001 (article link)

144. H. Zhou, M. Watson, C. T. Bernadt, S. Lin, C. Lin, J. H. Ritter, A. Wein, S. Mahler, S. Rawal, R. Govindan, C. Yang, R. J. Cote; AI-guided histopathology predicts brain metastasis in lung cancer patients; The Journal of Pathology (2024); PMID: 38433721 [PubMed] doi: 10.1038/s41598-022-05990-6 (article link)


143. H. Zhou, B. Y. Feng, S. Lin, M. Liang, C. Metzler, C. Yang; FPM-INR: Fourier ptychographic microscopy image stack reconstruction using implicit neural representations; Optica 10, 1679-1687 (2023). doi: 10.1364/OPTICA.505283 (article link) (pdf) (project page)

142. V. Fay, O. Zhang, R. Cao, C. Yang; Improving planar optode lifetime: encapsulation and optical release of pH-sensing optodes and assessment of their lifetime in situ; J Soils Sediments (2023). doi: 10.1007/s11368-023-03650-4 (article link)

141. Y.X. Huang, S. Mahler, J. Mertz, C. Yang; Interferometric speckle visibility spectroscopy (iSVS) for measuring decorrelation time and dynamics of moving samples with enhanced signal-to-noise ratio and relaxed reference requirements; Optics Express 31, 31253-31266 (2023); PMID: 37710649 [PubMed] doi: 10.1364/OE.499473 (article link) (pdf)

140. S. Mahler, Y.X. Huang, M. Liang, A. Avalos, J.M. Tyszka, J. Mertz, C. Yang; Assessing depth sensitivity in laser interferometry speckle visibility spectroscopy (iSVS) through source-to-detector distance variation and cerebral blood flow monitoring in humans and rabbits; Biomedical Optics Express 14, 4964-4978 (2023); PMID: 37791277 [PubMed] doi: 10.1364/BOE.498815 (article link) (pdf)

139. C. Shen, S. Rawal, R. Brown, H. Zhou, A. Agarwal, M. Watson, R. Cote, C. and Yang.; Automatic detection of circulating tumor cells and cancer associated fibroblasts using deep learning; Nature Scientific Reports 13, 5708 (2023). PMCID: PMC10082202 doi: 10.1038/s41598-023-32955-0. (article link) (pdf)

138. H.X. Chang, R. Zhao, S. Jiang, C. Shen, G. Zheng, C. Yang, L. Bian.; Complex-domain-enhancing neural network for large-scale coherent imaging; Advanced Photonics Nexus 2, 046006 (2023). doi: 10.1117/1.APN.2.4.046006 (article link) (pdf)

137. X. Chang, C. Shen, S. Liu, D. Zheng, S. Wang, C. Yang, N. E. Huang, and L. Bian; Robust Kramers–Kronig holographic imaging with Hilbert–Huang transform; Opt. Lett. 48, 4161-4164 (2023); PMID: 37527143 [PubMed] doi: 10.1364/OL.495895 (article link) (pdf)


136. H. Ayaz, W. B. Baker, G. Blaney et al.; Optical imaging and spectroscopy for the study of the human brain: status report; Neurophotonics 9, S24001 (2022); PMID: 36052058 PMCID: PMC9424749 [PubMed] doi: 10.1117/1.NPh.9.S2.S24001 (article link) (pdf)

135. H. Zhou, C. Shen, M. Liang, C. Yang; Analysis of post-reconstruction digital refocusing in Fourier ptychographic microscopy; Optical Engineering, 61, 073102 (2022). doi: 10.1117/1.OE.61.7.073102 (article link) (pdf)

134. M. Liang, C. Bernadt, J. S. B. Wong, C. Choi, R. Cote, C. Yang; All-in-focus fine needle aspiration biopsy imaging based on Fourier ptychographic microscopy; Journal of Pathology Informatics 13, 100119 (2022). PMID: 36268073 PMCID: PMC9577034 [PubMed] doi: 10.1016/j.jpi.2022.100119 (article link) (pdf)

133. S. Gigan, O. Katz, H.B deAguiar, E.R. Andresen, A. Aubry, J. Bertolotti, E. Bossy, D. Bouchet, J. Brake, S. Brasselet, Y. Bromberg, H. Cao, T. Chaigne, Z. Cheng, W. Choi, T. Čižmár, M. Cui, V.R. Curtis, H. Defienne, M. Hofer, R. Horisaki, R. Horstmeyer, N. Ji, A.K. LaViolette, J. Mertz, C. Moser, A.P. Mosk, N.C. Pégard, R. Piestun, S. Popoff, D.B. Phillips, D. Psaltis, B. Rahmani, H. Rigneault, S. Rotter, L. Tian, I.M. Vellekoop, L. Waller, L. Wang, T. Weber, S. Xiao, C. Xu, A. Yamilov, C. Yang and H. Yılmaz; Roadmap on Wavefront Shaping and deep imaging in complex media; J. Phys. Photonics 4, 042501 (2022). doi: 10.1088/2515-7647/ac76f9 (article link) (pdf)

132. M. Liang and C. Yang; Implementation of free-space Fourier Ptychography with near maximum system numerical aperture; Opt. Express 30, 20321-20332 (2022). PMCID: PMC9363023 doi: 10.1364/OE.459833 (article link) (pdf)

131. R. Cao, F. de Goumoens, B. Blochet, J. Xu and C. Yang; High-resolution non-line-of-sight imaging employing active focusing; Nature Photonics 16, pg 462–468 (2022). doi: 10.1038/s41566-022-01009-8 (article link) (pdf)

130. A. Abdelfattah, S. Ahuja, T. Akkin, S. Rao Allu, D.A. Boas, J. Brake, E.M. Buckley, R.E. Campbell, A.I. Chen, X. Cheng, T. Cižmár, I. Costantini, M. De Vittorio, A. Devor, P.R. Doran, M. El Khatib, V. Emiliani, N. Fomin-Thunemann, Y. Fainman, T. Fernández Alfonso, C.G.L. Ferri, A. Gilad, X. Han, A. Harris, E.M.C. Hillman, U. Hochgeschwender, M.G. Holt, N. Ji, K. Kiliç, E.M.R. Lake, L. Li, T. Li, P. Mächler, R.C. Mesquita, E.W. Miller, K.M. Naga Srinivas Nadella, U.V. Nägerl, Y. Nasu, A. Nimmerjahn, P. Ondrácková, F.S. Pavone, C. Perez Campos, D.S. Peterka, F. Pisano, F. Pisanello, F. Puppo, B.L. Sabatini, S. Sadegh, S. Sakadžic, S. Shoham, S.N. Shroff, R.A. Silver, R.R. Sims, S.L. Smith, V.J. Srinivasan, M. Thunemann, L. Tian, L. Tian, T. Troxler, A. Valera, A. Vaziri, S.A. Vinogradov, F. Vitale, L. Wang, H. Uhlířová, C. Xu, C. Yang, MH Yang, G. Yellen, O. Yizhar, Y. Zhao; Neurophotonic tools for microscopic measurements and manipulation: status report; Neurophotonics 9(S1), 013001 (2022). PMCID: PMC9047450. doi: 10.1117/1.NPh.9.S1.013001 (article link) (pdf)

129. M. Cua, B. Blochet and C. Yang; Speckle-resolved optical coherence tomography for mesoscopic imaging within scattering media; Biomed. Opt. Express 13, pg 2068-81 (2022). PMCID: PMC9045937. doi: 10.1364/BOE.448969 (article link) (pdf)

128. C. Shen, A. Lamba, M. Zhu, R. Zhang, M. Zernicka-Goetz, C. Yang; Stain-free detection of embryo polarization using deep learning; Nature Scientific Reports 12 (1), 2404 (2022). PMCID: PMC8844381 doi: 10.1038/s41598-022-05990-6 (article link) (pdf)


127. C. Shen, M. Liang, A. Pan and C. Yang; Non-iterative complex wave-field reconstruction based on Kramers–Kronigrelations; Photonics Research 9, pp. 1003-1012 (2021). doi: 10.1364/PRJ.419886 (article link) (pdf)

126. H. Ruan, J. Xu, C. Yang; Optical information transmission through complex scattering media with optical-channel-based intensity streaming; Nature Communications volume 12, Article number: 2411 (Apr 2021). PMCID: PMC8065103 doi: 10.1038/s41467-021-22692-1 (article link) (pdf)

125. L.L. Lai, M. Invernizzi, M. White, C. Han, H. Jiangtao, H. Lu, C. Yang and J. Lin; Feasibility and safety study of a high resolution wide field-of-view scanning endoscope for circumferential intraluminal intestinal imaging; Nature Scientific Reports 11, 3544 (2021). PMCID: PMC7878729. doi: 10.1038/s41598-021-82962-2 (article link) (pdf)

124. G. Zheng, C. Shen, S. Jiang, P. Song, C. Yang; Concept, implementations and applications of Fourier Ptychography; Nature Reviews Physics 3, 207 (2021). doi: 10.1038/s42254-021-00280-y (article link) (pdf)

123. J. Xu, A.K. Jahromi, C. Yang; Diffusing wave spectroscopy: a unified treatment on temporal sampling and speckle ensemble methods; APL Photonics 6 (1), 016105 (2021). doi: 10.1063/5.0034576 (article link) (pdf)


122. J. Xu*, A.K. Jahromi*, J. Brake, J.E. Robinson and C. Yang; Interferometric speckle visibility spectroscopy (ISVS) for human cerebral blood flow monitoring; APL Photonics 5, 126102 (2020). *These authors contributed equally to this work. doi: 10.1063/5.0021988. (article link) (pdf) (supplementary pdf)

121. M. Cua, D. Martin, P. Meza, G. Torraca, T. Pearson, S. Cao and C. Yang; Method to Determine Syringe Silicone Oil Layer Heterogeneity and Investigation of its Impact on Product Particle Counts; Journal of Pharmaceutical Sciences 109, 3292-3299 (2020). PMCID: PMC7572663 doi: 10.1016/j.xphs.2020.07.012. (article link) (pdf)

120. Y. Liu*, R. Cao*, J. Xu, H. Ruan and C. Yang; Imaging through highly scattering human skulls with ultrasound-modulated optical tomography; Optics Letters 45, 2973-76 (2020). *These authors contributed equally to this work. PMID: 32479436 doi: 10.1364/ol.390920. (article link) (pdf)

119. H. Ruan*, Y. Liu*, J. Xu, Y. Huang and C. Yang; Fluorescence imaging through dynamic scattering media with speckle-encoded ultrasound-modulated light correlation; Nature Photonics 14, 511-516 (2020). *These authors contributed equally to this work. doi: 10.1038/s41566-020-0630-0. (article link) (pdf)

118. J. Xu, R. Cao, M. Cua and C. Yang; Single-shot surface 3D imaging by optical coherence factor; Optics Letters 45, pp. 1734-37 (2020). PMID: 32235986 doi: 10.1364/OL.384551. (article link) (pdf)

117. Y. Huang, M. Cua, J. Brake, Y. Liu and C. Yang; Investigating ultrasound-light interaction in scattering media; Journal of Biomedical Optics 25, pp. 025002 (2020). PMCID: PMC7043283 doi: 10.1117/1.JBO.25.2.025002. (article link) (pdf)


116. C. Shen, A.C.S. Chan, J. Chung, D. E. Williams, A. Hajimiri and C. Yang; Computational aberration correction of VIS-NIR multispectral imaging microscopy based on Fourier ptychography; Optics Express 27, pp. 24923-24937 (2019). PMID: 31510373 doi: 10.1364/OE.27.024923. (article link) (pdf)

115. A.C.S. Chan, J. Kim, A. Pan, H. Xu, D. Nojima, C. Hale, S. Wang and C. Yang; Parallel Fourier ptychographic microscopy for high-throughput screening with 96 cameras (96 Eyes); Nature Scientific Reports Article number: 11114 (2019). PMID: 31366957 PMCID: PMC6668459 doi: 10.1038/s41598-019-47146-z. (article link) (pdf)

114. J. Chung, G.W. Martinez, K.C. Lencioni, S.R. Sadda and C. Yang; Computational aberration compensation by coded-aperture-based correction of aberration obtained from optical Fourier coding and blur estimation; Optica 6, pp. 647-661 (2019). PMCID: PMC7597901 doi: 10.1364/OPTICA.6.000647. (article link) (pdf)


113. J. Xu, M. Cua, E.H. Zhou, Y. Horie, A. Faraon and C. Yang; Wide-angular-range and high-resolution beam steering by a metasurface-coupled phased array; Optics Letters 43, pp. 5255-58 (2018). PMID: 30382981 doi: 10.1364/OL.43.005255. (article link) (pdf)

112. M. Jang, Y. Horie, A. Shibukawa, J. Brake, Y. Liu, S.M. Kamali, A. Arbabi, H. Ruan, A. Faraon and C. Yang; Wavefront shaping with disorder-engineered metasurfaces; Nature Photonics 12, pp. 84-90 (2018). PMID: 29527234 PMCID: PMC5842956 doi: 10.1038/s41566-017-0078-z. (article link) (pdf)

111. Y. Liu*, Y. Shen*, H. Ruan, F. Brodie, T. T. W. Wong, C. Yang, and L. V. Wang; Time-reversed ultrasonically encoded optical focusing through highly scattering ex vivo human cataractous lenses; Journal of Biomedical Optics 23, 010501 (2018). PMID: 29322749; PMCID: PMC5762002. *These authors contributed equally to this work. doi: 10.1117/1.JBO.23.1.010501. (article link) (pdf)


110. H. Ruan*, J. Brake*, J. E. Robinson, Y. Liu, M. Jang, C. Xiao, C. Zhou, V. Gradinaru, C. Yang; Deep tissue optical focusing and optogenetic modulation with time-reversed ultrasonically encoded light; Science Advances 12, eaao5520 (2017). PMID: 29226248; PMCID: PMC5722648. *These authors contributed equally to this work. doi: 10.1126/sciadv.aao5520. (article link) (pdf) (Supplementary pdf)

109. J. Xu, H. Ruan, Y. Liu, H. Zhou and C. Yang; Focusing light through scattering media by transmission matrix inversion; Optics Express 25, pp. 27234-46 (2017). PMID: 29092201 PMCID: PMC5941990. doi: 10.1364/OE.25.027234. (article link) (pdf)

108. M. M. Qureshi*, J. Brake*, H.-J. Jeon, H. Ruan, Y. Liu, A. M. Safi, T. J. Eom, C. Yang and E. Chung; In vivo study of optical speckle decorrelation time across depths in the mouse brain; Biomedical Optics Express 8, pp. 4855-64, (2017). PMID: 29188086. PMCID: PMC5695936. *These authors contributed equally to this work. doi: 10.1364/BOE.8.004855. (article link) (pdf) (Erratum)

107. H. Ruan, T. Haber, Y. Liu, J. Brake, J. Kim, J. M. Berlin and C. Yang; Focusing light inside scattering media with magnetic-particle-guided wavefront shaping; Optica 4, pp. 1337-43 (2017). PMID: 29623290 PMCID: PMC5881932 doi: 10.1364/OPTICA.4.001337. (article link) (pdf) (Supplementary pdf)

106. M. Cua, H. Zhou, and C. Yang; Imaging moving targets through scattering media; Optics Express 25, pp. 3935-45 (2017). PMID: 28241603 PMCID: PMC5772388 doi: 10.1364/OE.25.003935. (article link) (pdf)

105. M. Jang, C. Yang, and I.M. Vellekoop; Optical Phase Conjugation with Less Than a Photon per Degree of Freedom; Physical Review Letters 118, pp. 093902 (2017). NIHMS ID: NIHMS871292. PMID: 28306287 PMCID: PMC5508849 doi: 10.1103/PhysRevLett.118.093902. (article link) (pdf)


104. J. Chung, H. Lu, X. Ou, H. Zhou and C. Yang; Wide-field Fourier ptychographic microscopy using laser illumination source; Biomedical Optics Express 7, pp. 4787-4802 (2016). PMID: 27896016. PMCID: PMC5119616. doi: 10.1364/BOE.7.004787. (article link) (pdf)

103. H. Lu, J. Chung, X. Ou and C. Yang; Quantitative phase imaging and complex field reconstruction by pupil modulation differential phase contrast; Optics Express 24, pp. 25345-25361 (2016). PMID: 27828473. PMCID: PMC5234501 doi: 10.1364/OE.24.025345. (article link) (pdf)

102. L. Bian, G. Zheng, K. Guo, J. Suo, C. Yang, F. Chen and Q. Dai; Motion-corrected Fourier ptychography; Biomedical Optics Express 7, pp. 4543-4553 (2016). PMID: 27895994. PMCID: PMC5119594. doi: 10.1364/BOE.7.004543. (article link) (pdf)

101. E.H. Zhou, A. Shibukawa, J. Brake, H. Ruan and C. Yang; Glare suppression by coherence gated negation; Optica 10, pp. 1107-1113 (2016). NIHMSID: NIHMS835229. PMID: 28713849; PMCID: PMC5509221. doi: 10.1364/OPTICA.3.001107. (article link) (pdf)

100. X. Ou, J. Chung, R. Horstmeyer and C. Yang; Aperture scanning Fourier ptychographic microscopy; Biomedical Optics Express 7, pp. 3140-3150 (2016). PMID: 27570705. PMCID: PMC4986821. doi: 10.1364/BOE.7.003140. (article link) (pdf)

99. R. Horstmeyer, J. Chung, X. Ou, G. Zheng and C. Yang; Diffraction tomography with Fourier ptychography; Optica 3, pp. 827-835 (2016). NIHMSID: NIHMS835228. PMID: 28736737; PMCID: PMC5521281. doi: 10.1364/OPTICA.3.000827. (article link) (pdf)

98. J. Kim, B.M. Henley, C.H. Kim, H.A. Lester and C. Yang; Incubator embedded cell culture imaging system (EmSight) based on Fourier ptychographic microscopy; Biomedical Optics Express 7, pp. 3097-3110 (2016). PMID: 27570701. PMCID: PMC4986817 doi: 10.1364/BOE.7.003097. (article link) (pdf)

97. L. Bian, J. Suo, J. Chung, X. Ou, C. Yang, F. Chen and Q. Dai; Fourier ptychographic reconstruction using Poisson maximum likelihood and truncated Wirtinger gradient; Nature Scientific Reports 6, Article number: 27384 (2016). PMID: 27283980. PMCID: PMC4901273. doi:10.1038/srep27384. (article link) (pdf)

96. J. Ryu*, M. Jang*, T.J. Eom, C. Yang and E. Chung; Optical phase conjugation assisted scattering lens: variable focusing and 3D patterning; Nature Scientific Reports 6, Article number: 23494 (2016). PMID: 27049442. PMCID: PMC4877672. *These authors contributed equally to this work. doi:10.1038/srep23494. (article link) (pdf)

95. R. Horstmeyer, R. Heintzmann, G. Popescu, L. Waller and C. Yang; Standardizing the resolution claims for coherent microscopy; (Commentary); Nature Photonics 10, pp. 68–71 (2016). doi:10.1038/nphoton.2015.279. (article link) (commentary pdf)

94. J. Brake*, M. Jang* and C. Yang; Analyzing the relationship between decorrelation time and tissue thickness in acute rat brain slices using multispeckle diffusing wave spectroscopy; Journal of the Optical Society of America A, 33, pp. 270-75 (2016). PMCID: PMC4783160. PMID: 26831778. *These authors contributed equally to this work. doi: 10.1364/JOSAA.33.000270. (article link) (pdf)

93. J. Chung, J. Kim, X. Ou, R. Horstmeyer and C. Yang; Wide field-of-view fluorescence image deconvolution with aberration-estimation from Fourier ptychography; Biomedical Optics Express 7, pp. 352-368 (2016). PMID: 26977345 [PubMed] PMCID: PMC4771454 doi: 10.1364/BOE.7.000352. (article link) (pdf)


92. H. Ruan*, M. Jang* and C. Yang; Optical focusing inside scattering media with time-reversed ultrasound microbubble encoded light; Nature Communications 6, Article number: 8968 (2015). PMID: 26597439; PMCID: PMC4673873 *These authors contributed equally to this work. doi:10.1038/ncomms9968. (article link) (pdf)

91. R. Horstmeyer, H. Ruan and C. Yang; Guidestar-assisted wavefront-shaping methods for focusing light into biological tissue; Nature Photonics 9, pp. 563-571 (2015). PMID: 27293480. PMCID: PMC4900467. doi:10.1038/nphoton.2015.140. (article link) (pdf)

90. J. Chung*, X. Ou*, R.P. Kulkarni, C. Yang; Counting White Blood Cells from a Blood Smear Using Fourier Ptychographic Microscopy; PLoS ONE 10, pp. e0133489 (2015). PMID: 26186353; PMCID: PMC4506059 *These authors contributed equally to this work. doi:10.1371/journal.pone.0133489. (article link) (pdf)

89. D. Wang*, E.H. Zhou*, J. Brake, H. Ruan, M. Jang and C. Yang; Focusing through dynamic tissue with millisecond digital optical phase conjugation; Optica 2, pp. 728-735 (2015). PMID: 26677458; PMCID: PMC4677392 *These authors contributed equally to this work. doi:10.1364/OPTICA.2.000728. (article link) (pdf)

88. B. Judkewitz*, R. Horstmeyer*, I. M. Vellekoop, I. N. Papadopoulos and C. Yang; Translation correlations in anisotropically scattering media; Nature Physics 11, pp. 684-689 (2015). *These authors contributed equally to this work. doi:10.1038/nphys3373. (article link) (pdf)

87. R. Horstmeyer, S. Assawaworrarit, U. Ruhrmair and C. Yang; Physically secure and fully reconfigurable data storage using optical scattering; IEEE Hardware Oriented Security and Trust (HOST) 2015. (article link) (pdf)

86. R. Horstmeyer, R.Y. Chen, X. Ou, B. Ames, J.A. Tropp and C. Yang; Solving ptychography with a convex relaxation; New Journal of Physics 15, pp. 053044 (2015). PMID: 26146480 [PubMed] PMCID: PMC4486359 doi:10.1088/1367-2630/17/5/053044 (article link) (pdf)

85. R. Horstmeyer, X. Ou, G. Zheng, P. Willems and C. Yang; Digital pathology with Fourier ptychography; Computerized Medical Imaging and Graphics 42, pp. 38-43 (2015). Copyright 2014 Elsevier Ltd. All rights reserved. PubMed PMID: 25481664; PubMed Central PMCID: PMC4369155. doi:10.1016/j.compmedimag.2014.11.005 (article link) (pdf)

84. X. Ou, R. Horstmeyer, G. Zheng and C. Yang; High numerical aperture Fourier ptychography: principle, implementation and characterization; Optics Express 23, pp. 3472-91 (2015). PMID: 25836203 [PubMed] PMCID: PMC5802253 doi: 10.1364/OE.23.003472 (article link) (pdf)

83. C. Han, J. Huangfu, L.L. Lai and C. Yang; A wide field-of-view scanning endoscope for whole anal canal imaging; Biomedical Optics Express 6, pp. 607-614 (2015). PMCID: PMC4354600 (article link) (pdf)

82. M. Jang*, H. Ruan*, I.M. Vellekoop, B. Judkewitz, E. Chung and C. Yang; Relation between speckle decorrelation and optical phase conjugation (OPC)-based turbidity suppression through dynamic scattering media: a study on in vivo mouse skin; Biomedical Optics Express 6, pp. 72-85 (2015). PMID: 25657876 [PubMed] PMCID: PMC4317115 *These authors contributed equally to this work. (article link) (pdf)


81. *H. Ruan, *M. Jang, B. Judkewitz and C. Yang; Iterative Time-Reversed Ultrasonically Encoded Light Focusing in Backscattering Mode; Scientific Reports 4, Article number: 7156 (2014). PMID: 25412687; PMCID: PMC4239564 *These authors contributed equally to this work. doi:10.1038/srep07156 (article link) (pdf)

80. E.H. Zhou, H. Ruan, C. Yang and B. Judkewitz; Focusing on moving targets through scattering samples; Optica 1, pp. 227-32 (2014). PMID: 25621302 [PubMed] PMCID: PMC4301445 doi: 10.1364/OPTICA.1.000227 (article link) (pdf)

79. R. Horstmeyer, X. Ou, J. Chung, G. Zheng and C. Yang; Overlapped Fourier coding for optical aberration removal; Optics Express 22, pp. 24062-80 (2014). PMID: 25321982; PMCID: PMC4247187 doi: 10.1364/OE.22.024062 (article link) (pdf)

78. J.H. Jung, C. Han, S.A. Lee, J. Kim and C. Yang; Microfluidic-integrated laser-controlled microactuators with on-chip microscopy imaging functionality; Royal Society of Chemistry: Lab on a Chip 14, pp. 3781-89 (2014). PMID: 25099225; PMCID: PMC4153594; doi: 10.1039/C4LC00790E (article link) (pdf) (supplemental material 1) Also find suplemental video on article link.

77. S.A. Lee and C. Yang; A smartphone-based chip-scale microscope using ambient illumination; Royal Society of Chemistry: Lab on a Chip 14, pp. 3056-3063 (2014). PMID: 24964209; PMCID: PMC4124038; doi: 10.1039/c4lc00523f (article link) (pdf) (supplemental video 1) (supplemental video 2)

76. A. Williams, J. Chung, X. Ou, G. Zheng, S. Rawal, Z. Ao, R. Datar, C. Yang and R. Cote; Fourier ptychographic microscopy for filtration-based circulating tumor cell enumeration and analysis; Journal of Biomedical Optics (SPIE Digital Library) 19, pp. 066007 (2014). PMID: 24949708 [PubMed - as supplied by publisher] PMCID: PMC4572097 doi: 10.1117/1.JBO.19.6.066007 (article link) (pdf)

75. J. Kim, J. Erath, A. Rodriguez and C. Yang; A high-efficiency microfluidic device for size-selective trapping and sorting; Lab on a Chip 14, pp. 2480-90 (2014). PMID: 24850190; PMCID: PMC4073585; doi: 10.1039/C4LC00219A (article link) (pdf)

74. *M. Jang, *H. Ruan, E.H. Zhou, B. Judkewitz, and C. Yang; Method for auto-alignment of digital optical phase conjugation systems based on digital propagation; Optics Express 22, pp. 14054-71 (2014). PMID: 24977504; PMCID: PMC4083057; doi: 10.1364/OE.22.014054 (article link) (pdf) *These authors contributed equally to this work.

73. B. Judkewitz and C. Yang; Axial standing-wave illumination frequency-domain imaging (SWIF); Optics Express 22, pp. 11001-10 (2014). PMID: 24921798; PMCID: PMC4083045; doi: 10.1364/OE.22.011001 (article link) (pdf)

72. J.L. Hollmann, R. Horstmeyer, C. Yang and C.A. DiMarzio; Diffusion model for ultrasound-modulated light; Journal of Biomedical Optics 19, pp. 035005 (2014). PMID: 24638247 [PubMed]; doi: 10.1117/1.JBO.19.3.035005 (article link) (pdf)

71. C. Han and C. Yang; Viral plaque analysis on a wide field-of-view, time-lapse, on-chip imaging platform; Analyst 139, pp. 3727-34 (2014). PMID: 24611157; PMCID: PMC4077935; (article link) (pdf)

70. M. Jang, H. Ruan, B. Judkewitz and C. Yang; Model for estimating the penetration depth limit of the time-reversed ultrasonically encoded optical focusing technique; Optics Express 22, pp. 5787- 5807 (2014). PMID: 24663917; PMCID: PMC4086332; (article link) (pdf)

69. S.A. Lee, J. Erath, G. Zheng, X. Ou, P. Willems, D. Eichinger, A. Rodriguez and C. Yang; Imaging and Identification of Waterborne Parasites Using a Chip-Scale Microscope; PLoS ONE 9, e89712 (2014). PMID: 24586978; PMCID: PMC3935895; doi:10.1371/journal.pone.0089712 (article link) (pdf)

68. X. Ou, G. Zheng and C. Yang; Embedded pupil function recovery for Fourier ptychographic microscopy; Optics Express 22, 4960-72 (2014). PMID: 24663835; PMCID: PMC4086333; (article link) (pdf)

67. R. Horstmeyer and C. Yang; A phase space model of Fourier ptychographic microscopy; Optics Express 22, pp. 338-58 (2014). PMID: 24514995; PMCID: PMC3926543; (article link) (pdf)

66. G. Zheng, X. Ou, and C. Yang; 0.5 gigapixel microscopy using a flatbed scanner; Biomedical Optics Express 5, pp. 1-8 (2014). PMID: 24466471; PMCID: PMC3891323; doi:10.1364/BOE.5.000001 (article link) (pdf)


65. R. Horstmeyer, B. Judkewitz, I.M. Vellekoop, S. Assawaworrarit and C. Yang; Physical key-protected one-time pad; Nature Collections Scientific Reports 3, Article number 3543 (2013). PMID: 24345925; PMCID: PMC3866593; doi:10.1038/srep03543 (article link) (pdf)

64. *X. Ou, *R. Horstmeyer, C. Yang and G. Zheng; Quantitative phase imaging via Fourier ptychographic microscopy; Optics Letters 38, pp. 4845-48 (2013). PMID: 24322147 [PubMed] PMCID: PMC4277232 (article link) (pdf) *These authors contributed equally to this work.

63. G. Zheng, R. Horstmeyer and C. Yang; Wide-field, high-resolution Fourier ptychographic microscopy; Nature Photonics 7, pp. 739-45 (2013). PMID: 25243016; PMCID: PMC4169052; doi: 10.1038/nphoton.2013.187 (article link) (pdf)

62. G. Zheng, X. Ou, R. Horstmeyer and C. Yang; Characterization of spatially varying aberrations for wide field-of-view microscopy; Optics Express 21, pp. 15131-43 (2013). PMID: 23842300; PMCID: PMC3724395; (article link) (pdf)

61. S. Pang, C. Han, J. Erath, A. Rodriguez and C. Yang; Wide field-of-view Talbot grid-based microscopy for multicolor fluorescence imaging; Optics Express 21, pp. 14555-65 (2013). PMID: 23787643; PMCID: PMC3726246; doi:10.1364/OE.21.014555 (article link) (pdf)

60. M. Jang, A. Sentenac and C. Yang; Optical phase conjugation (OPC)-assisted isotropic focusing; Optics Express 21, pp. 8781-92 (2013). PMID: 23571967; PMCID: PMC3641024; (article link) (pdf)

59. S.A. Lee, X. Ou, J.E. Lee and C. Yang; Chip-scale fluorescence microscope based on a silo-filter complementary metal-oxide semiconductor image sensor; Optics Letters 38, pp. 1817-19 (2013). PMID: 23722754; PMCID: PMC3740726; (article link) (pdf)

58. *B. Judkewitz, *Y.M. Wang, R. Horstmeyer, A. Mathy and C. Yang; Speckle-scale focusing in the diffusive regime with time-reversal of variance-encoded light (TROVE); Nature Photonics 7, pp. 300-05 (2013). PMID: 23814605; PMCID: PMC3692396 doi: 10.1038/nphoton.2013.31 (article link) (pdf) *These authors contributed equally to this work.

57. C. Han, S. Pang, D.V. Bower, P. Yiu and C. Yang; Wide Field-of-View On-Chip Talbot Fluorescence Microscopy for Longitudinal Cell Culture Monitoring from within the Incubator; Analytical Chemistry 85, pp. 2356-60 (2013). PMID: 23350531; PMCID: PMC3587116; doi: 10.1021/ac303356v (article link) (pdf)

56. J.L. Hollmann, R. Horstmeyer, C. Yang and C.A. DiMarzio; Analysis and modeling of an ultrasound-modulated guidestar to increase the depth of focusing in a turbid medium; Journal of Biomedical Optics 18, pp. 025004 (2013). PMID: 23400416 [PubMed] doi: 10.1117/1.JBO.18.2.025004 (article link) (pdf)


55. S. Pang, C. Han, M. Kato, P.W. Sternberg and C. Yang; Wide and scalable field-of-view Talbot-grid-based fluorescence microscopy; Optics Letters 37, pp. 5018-20 (2012). PMID: 23202123; PMCID: PMC3718313; (article link) (pdf)

54. R. Horstmeyer, R.Y. Chen, B. Judkewitz and C. Yang; Markov speckle for efficient random bit generation; Optics Express 20, pp. 26394-410 (2012). PMID: 23187494 [PubMed] (article link) (pdf)

53. I.M. Vellekoop, M. Cui and C. Yang; Digital optical phase conjugation of fluorescence in turbid tissue; Applied Physics Letters 101, pp. 081108 (2012). PMID: 22991478; PMCID: PMC3436909; doi: 10.1063/1.4745775 (article link) (pdf)

52. *Y.M. Wang, *B. Judkewitz, C.A. DiMarzio and C. Yang; Deep-tissue focal fluorescence imaging with digitally time-reversed ultrasound-encoded light; Nature Communications 3, Article number: 928 (2012). PMID: 22735456; PMCID: PMC3621452 doi: 10.1038/ncomms1925 (article link) (pdf) *These authors contributed equally to this work.

51. S.A. Lee, G. Zheng, N. Mukherjee and C. Yang; On-chip continuous monitoring of motile microorganisms on an ePetri platform; Lab on a Chip 12, pp. 2385-90 (2012). PMID: 22522781; PMCID: PMC3371133; doi: 10.1039/C2LC40090A (article link) (pdf)

50. J. Ren, X. Cui, L.M. Lee and C. Yang; Quantitative surface normal measurement by a wavefront camera; Optics Letters 37, pp. 199-201 (2012). PMID: 22854466 [PubMed] doi: 10.1364/OL.37.000199 (article link) (pdf)


49. S.A. Lee, R. Leitao, G. Zheng, S. Yang, A. Rodriguez and C. Yang; Color Capable Sub-Pixel Resolving Optofluidic Microscope and Its Application to Blood Cell Imaging for Malaria Diagnosis; PLoS ONE 6, e26127 (2011). PMID: 22022535; PMCID: PMC3191177 doi:10.1371/journal.pone.0026127 (article link) (pdf)

48. G. Zheng, C. Kolner and C. Yang; Microscopy refocusing and dark-field imaging by using a simple LED array; Optics Letters 36, pp. 3987-89 (2011). PMID: 22002361 [PubMed] L.36.003987 (article link) (pdf)

47. G. Zheng, S.A. Lee, Y. Antebi, M.B. Elowitz and C. Yang; The ePetri dish, an on-chip cell imaging platform based on subpixel perspective sweeping microscopy (SPSM); Proceedings of the National Academy of Science 108, pp. 16889-94 (2011). PMCID: PMC3193234; doi: 10.1073/pnas.11 10681108 (article link) (pdf)

46. S. Pang, C. Han, L.M. Lee and C. Yang; Fluorescence microscopy imaging with a Fresnel zone plate array based optofluidic microscope; Lab on a Chip 11, pp. 3698-702 (2011). PMID: 21935556; PMCID: PMC3710399; doi: 10.1039/c1lc20654k (article link) (pdf)

45. J. Wu, G. Zheng, Z. Li and C. Yang; Focal plane tuning in wide-field-of-view microscope with Talbot pattern illumination; Optics Letters 36, pp. 2179-81 (2011). PMID: 21685959 [PubMed - indexed for MEDLINE] doi:10.1364/OL.36.002179 (article link) (pdf)

44. J. Ren, H.K. Gille, J. Wu and C. Yang; Ex vivo optical coherence tomography imaging of collector channels with a scanning endoscopic probe; Investigative Ophthalmology & Visual Science 52, pp. 3921-25 (2011). PMID: 21357387 [PubMed] doi: 10.1167/iovs.10-6744 (article link) (pdf)


43. G. Zheng, S.A. Lee, S. Yang and C. Yang; Sub-pixel resolving optofluidic microscope for on-chip cell imaging; Lab on a Chip 10, pp. 3125-29 (2010). PMID: 20877904 [PubMed - indexed for MEDLINE] doi: 10.1039/c0lc00213e (article link) (pdf)

42. G. Zheng and C. Yang; Improving Weak-Signal Identification via Predetection Background Suppression by a Pixel-Level, Surface-Wave Enabled Dark-Field Aperture; Optics Letters 35, pp. 2636-38 (2010). PMID: 20680083 [PubMed] doi: 10.1364/OL.35.002636 (article link) (pdf)

41. X. Cui, J. Ren, G. Tearney and C. Yang; Wavefront Image Sensor Chip; Optics Express 18, pp. 16685-701 (2010). PMID: 20721059; PMCID: PMC3408896 doi:10.1364/OE.18.016685 (article link) (pdf)

40. G. Zheng, Y.M. Wang and C. Yang; Pixel level optical-transfer-function design based on the surface-wave-interferometry aperture; Optics Express 18, pp. 16499-506 (2010). PMID: 20721038; PMCID: PMC3408955 doi:10.1364/OE.18.016499 (article link) (pdf)

39. J. Wu, L.M. Lee and C. Yang; Focus grid generation by in-line holography; Optics Express 18, pp. 14366-374 (2010). PMID: 20639921 [PubMed] doi:10.1364/OE.18.014366 (article link) (pdf)

38. J. Wu, X. Cui, G. Zheng, Y.M. Wang, L.M. Lee and C. Yang; Wide field-of-view microscope based on holographic focus grid illumination; Optics Letters 35, pp. 2188-90 (2010). PMID: 20596189 [PubMed] doi:10.1364/OL.35.002188 (article link) (pdf)

37. G. Zheng, X. Cui and C. Yang; Surface-Wave-Enabled Darkfield Aperture for Background Suppression During Weak Signal Detection; Proceedings of the National Academy of Science 107, pp. 9043-48 (2010). PMID: 20439760; PMCID: PMC2889114; doi:10.1073/pnas.0912563107 (article link) (pdf)

36. E.J. McDowell, M. Cui, I.M. Vellekoop, V. Senekerimyan, Z. Yaqoob and C. Yang; Turbidity suppression from the ballistic to the diffusive regime in biological tissues using optical phase conjugation; Journal of Biomedical Optics 15, pp. 025004 (2010). PMID: 20459245; PMCID: PMC2874046 (article link) (pdf)

35. M. Cui and C. Yang; Implementation of a digital optical phase conjugation system and its application to study the robustness of turbidity suppression by phase conjugation; Optics Express 18, pp. 3444-55 (2010). PMID: 20389354; PMCID: PMC3378352; doi:10.1364/OE.18.003444 (article link) (pdf)

34. S. Pang, X. Cui, J. DeModena, Y.M. Wang, P. Sternberg and C. Yang; Implementation of a color-capable optofluidic microscope on a RGB CMOS color sensor chip substrate; Lab on a Chip 10, pp. 411-14 (2010). PMID: 20126679 [PubMed] doi: 10.1039/b919004j (article link) (pdf)

33. M. Cui, E.J. McDowell and C. Yang; An in vivo study of turbidity suppression by optical phase conjugation (TSOPC) on rabbit ear; Optics Express 18, pp. 25-30 (2010). PMID: 20173817; PMCID: PMC3369536; doi:10.1364/OE.18.000025 (link article) (pdf)


32. Y.M. Wang, G. Zheng, and C. Yang; Characterization of acceptance angles of small circular apertures; Optics Express 17, pp. 23903-913 (2009). PMID: 20052101 [PubMed - indexed for MEDLINE] doi: 10.1364/OE.17.023903 (article link) (pdf)

31. J. Ren, J. Wu, E.J. McDowell and C. Yang; Manual-scanning optical coherence tomography probe based on position tracking; Optics Letters 34, pp. 3400-02 (2009). Also published in Virtual Journal of Biological Physics Research 2009, 18, Instrumentation Development. PMID: 19881607 [PubMed - indexed for MEDLINE] doi:10.1364/OL.34.003400 (article link) (pdf)

30. M. Cui, E.J. McDowell and C. Yang; Observation of polarization-gate based reconstruction quality improvement during the process of turbidity suppression by optical phase conjugation; Applied Physics Letters 95, pp. 123702-704 (2009). PMID: 19859580; PMCID: PMC2766401; doi:10.1063/1.3236836 (article link) (pdf)

29. L.M. Lee, X. Cui and C. Yang; The Application of on-chip Optofluidic Microscopy for Imaging Giardia lamblia Trophozoites and Cysts; Biomedical Microdevices 11, pp. 951-58 (2009). PMID: 19365730; PMCID: PMC2888668; doi:10.1007/s10544-009-9312-x (article link) (pdf)

28. G. Zheng, X. Heng and C. Yang; A Phase Conjugate Mirror Inspired Approach for Building Cloaking Structures with Left-handed Materials; New Journal of Physics 11, pp. 033010-25 (2009). PMID: 20126415; PMCID: PMC2814323 (article link) (pdf)


27. J. Wu, X. Cui, L.M. Lee and C. Yang; The application of Fresnel zone plate based projection in optofluidic microscopy; Optics Express 16, pp. 15595-602 (2008). PMID: 18825198; PMCID: PMC2688452 (article link) (pdf)

26. X. Cui, M. Lew and C. Yang; Quantitative differential interference contrast microscopy based on structured-aperture interference; Applied Physics Letters 93, pp. 091113-115 (2008). NIHMSID: 111214 (article link) (pdf)

25. X. Cui, L.M. Lee, X. Heng, W. Zhong, P.W. Sternberg, D. Psaltis and C. Yang; Lensless high-resolution on-chip optofluidic microscopes for Caenorhabditis elegans and cell imaging; Proceedings of the National Academy of Science 105, pp. 10670-75 (2008). PMID: 18663227; PMCID: PMC2488383; (article link) (pdf)

24. Z. Yaqoob, D. Psaltis, M.S. Feld and C. Yang; Optical phase conjugation for turbidity suppression in biological samples; Nature Photonics 2, pp. 110-115 (2008). PMID: 19492016; PMCID: PMC2688902 (article link) (pdf)

23. S. Han, M.V. Sarunic, J. Wu, M. Humayun and C. Yang; Handheld forward-imaging needle endoscope for ophthalmic optical coherence tomography inspection; Journal of Biomedical Optics 13, pp. 020505 (2008). PMID: 18465947 [PubMed - indexed for MEDLINE] (article link) (pdf)

22. E.J. McDowell, J. Ren and C. Yang; Fundamental sensitivity limit imposed by dark 1/f noise in the low optical signal detection regime; Optics Express 16, pp. 6822-32 (2008). PMID: 18545385 [PubMed - indexed for MEDLINE] (article link) (pdf)


21. J. Wu, Z. Yaqoob, X. Heng, L.M. Lee, X. Cui and C. Yang; Full field phase imaging using a harmonically matched diffraction grating pair based homodyne quadrature interferometer; Applied Physics Letters 90, pp. 151123-125 (2007). (article link) (pdf)

20. E.J. McDowell, X. Cui, Z. Yaqoob and C. Yang; A generalized noise variance analysis model and its application to the characterization of 1/f noise; Optics Express 15, pp. 3833-48 (2007). PMID: 19532627 [PubMed] (article link) (pdf)

19. E.J. McDowell, M.V. Sarunic, Z. Yaqoob and C. Yang; SNR enhancement through phase dependent signal reconstruction algorithms for phase separated interferometric signals; Optics Express 15, pp. 10103-122 (2007). PMID: 19547360 [PubMed] (article link) (pdf)

18. J. Fingler, D. Schwartz, C. Yang and S.E. Fraser; Mobility and transverse flow visualization using phase variance contrast with spectral domain optical coherence tomography; Optics Express 15, pp. 12636-653 (2007). PMID: 19550532 [PubMed] (article link) (pdf)

17. G. Zheng, L. Ran and C. Yang; Electromagnetic equivalent model for phase conjugate mirror based on the utilization of left-handed material; Optics Express 15, pp. 13877-885 (2007). PMID: 19550659 [PubMed] (article link) (pdf)

16. M. Lew, X. Cui, X. Heng and C. Yang; Interference of a four-hole aperture for on-chip quantitative two-dimensional differential phase imaging; Optics Letters 32, pp. 2963-65 (2007). PMID: 17938667 (article link) (pdf)

15. D.T. Raphael, C. Yang, N. Tresser, J. Wu, Y. Zhang and L. Rever; Images of Spinal Nerves and Adjacent Structures With Optical Coherence Tomography: Preliminary Animal Studies; The Journal of Pain 8, pp. 767-73 (2007). PMID: 17586098 [PubMed - indexed for MEDLINE] (article link) (pdf)

14. S. H. Tseng and C. Yang; 2-D PSTD Simulation of optical phase conjugation for turbidity suppression; Optics Express 15, pp. 16005-16 (2007). PMID: 19550887 [PubMed] (article link) (pdf)

13. X. Heng, E. Hsiao, D. Psaltis and C. Yang; An optical tweezer actuated, nanoaperture-grid based Optofluidic Microscope implementation; Optics Express 15, pp. 16367-75 (2007). PMID: 19550927 [PubMed] (article link) (pdf)

12. J. Wu, Z. Yaqoob, X. Heng, X. Cui and C. Yang; Harmonically matched grating-based full-field quantitative high-resolution phase microscope for observing dynamics of transparent biological samples; Optics Express 15, pp. 18141-55 (2007). PMID: 19551112 [PubMed - indexed for MEDLINE] (article link) (pdf)


11. J. Wu, M. Conry, C. Gu, F. Wang, Z. Yaqoob and C. Yang; Paired-angle-rotation scanning optical coherence tomography forward-imaging probe; Optics Letters 31, pp. 1265-67 (2006). PMID: 16642080 [PubMed - indexed for MEDLINE] (article link) (pdf)

10. Z. Yaqoob, J. Fingler, X. Heng and C. Yang; Homodyne en face optical coherence tomography; Optics Letters 31, pp. 1815-17 (2006). PMID: 16729080 [PubMed - indexed for MEDLINE] (article link) (pdf)

9. D. Psaltis, S. Quake and C. Yang; Developing optofluidic technology through the fusion of microfluidics and optics; Nature 442, pp. 381-86 (2006). PMID: 16871205 [PubMed - indexed for MEDLINE] (article link) (pdf)

8. X. Heng, D. Erickson, L.R. Baugh, Z. Yaqoob, P.W. Sternberg, D. Psaltis and C. Yang; Optofluidic microscopy: A Method for Implementing High Resolution Optical Microscope On A Chip; Lab on a Chip 6, pp. 1274-76 (2006). PMID: 17102839 [PubMed - indexed for MEDLINE] (article link) (pdf)

7. X. Cui, X. Heng, J. Wu, Z. Yaqoob, A. Scherer, D. Psaltis and C. Yang; Slanted Hole Array Beam Profiler (SHArP) - A high resolution on-chip beam profiler based on a linear aperture array; Optics Letters 31, pp. 3161-63 (2006). PMID: 17041668 [PubMed] (article link) (pdf)

6. Z. Yaqoob, J. Wu, X. Cui, X. Heng and C. Yang; Harmonically-related diffraction gratings-based interferometer for quadrature phase measurements; Optics Express 14, pp. 8127-37 (2006). PMID: 19529185 [PubMed] (article link) (pdf)

5. Z. Yaqoob, E.J. McDowell, J. Wu, J. Fingler, X. Heng and C. Yang; Molecular contrast optical coherence tomography: A pump-probe scheme using indocyanine green as a contrast agent; Journal of Biomedical Optics 11, pp. 054017 (2006). PMID: 17092166 [PubMed - indexed for MEDLINE] (article link) (pdf)

4. Z. Yaqoob, J. Wu, E.J. McDowell, X. Heng and C. Yang; Methods and application areas of endoscopic optical coherence tomography; Journal of Biomedical Optics 11, pp. 063001 (2006). PMID: 17212523 [PubMed - indexed for MEDLINE] (article link) (pdf)

3. X. Heng, X. Cui, D.W. Knapp, J. Wu, Z. Yaqoob, E.J. McDowell, D. Psaltis and C. Yang; Characterization of light collection through a subwavelength aperture from a point source; Optics Express 14, pp. 10410-25 (2006). PMID: 19529440 [PubMed - indexed for MEDLINE] (article link) (pdf)


2. Z. Yaqoob, J. Wu and C. Yang; Spectral domain optical coherence tomography: a better OCT imaging strategy; BioTechniques 39, pp. S6–S13 (2005). PMID 20158503 [PubMed – indexed for MEDLINE] (article link) (pdf)

1. C. Yang; Molecular contrast optical coherence tomography: A review; Photochemistry and Photobiology 81, pp. 215-37 (2005). PMID: 15588122; PMCID: PMC1283114 (article link) (pdf)


3. R. Horstmeyer, M. Hoffmann, H. Ruan, B. Judkewitz, C. Yang; Chapter 7, pg. 147; Imaging Deep in the Brain with Wavefront Engineering in Handbook of Neurophotonics edited by Francesco S. Pavone and Shy Shoham, published May 28, 2020 by CRC Press (ISBN 9781498718752)

2. Yeshaiahu Fainman, Luke Lee, Demetri Psaltis, and Changhuei Yang; Optofluidics: Fundamentals, Devices, and Applications (Biophotonics) published by McGraw-Hill, 2009 (ISBN-13: 978-0071601566)

1. Changhuei Yang, Xin Heng, Xiquan Cui and Demetri Psaltis, Ch. 10: Optofluidic Microscope - Fitting a Microscope Onto a Sensor Chip in CMOS Biotechnology edited by Hankho Lee, Donhee Ham, Robert M. Westervelt, published by Springer, 2007 (ISBN-13: 978-0387368368)

News Articles

N39. Seeing Through Opaque Media, by Robert Perkins; Caltech Media Relations, May 2020 (article link)

N38. Deep Imaging with a Handful of Photons, by Stewart Wills; Optics and Photonics News [Research News], 06 March 2017 (article link)

N37. Signal Processing Leads a Photographic and Imaging Revolution [Special Reports], by John Edwards; IEEE Signal Processing Magazine Vol 31 (3), 10-15, May 2014. (article link) (pdf)

N36. Fourier Ptychographic Microscopy: A Gigapixel Superscope for Biomedicine, by G. Zheng, X. Ou, R. Horstmeyer, J. Chung and C.Yang; Optics and Photonics News, OSA, Vol 25, 28-33, April 2014. (article link) (pdf)

N35. The Computer Will See You Now, by Katherine Bourzac; Nature Vol 502, S92-S94, Oct 31, 2013. (article link) (pdf)

N34. Turning a regular microscope into billion-pixel imaging system, by Elizabeth Armstrong Moore; CNET News, July 30, 2013. (article link) (pdf)

N33. Pushing Microscopy Beyond Standard Limits, by Kimm Fesenmaier; Caltech Media Relations, July 2013.

N32. Optofluidics 2013, by Ai-Qun Liu and Changhuei Yang; Editorial, Lab on a Chip Advance Article (2013) PMID: 23719899 [PubMed - as supplied by publisher] (pdf)

N31. Themed issue: Optofluidics, by Ai-Qun Liu and Changhuei Yang; Editorial, Lab on a Chip 12(19): 3539–3539 (2012) PMID: 22895846 [PubMed] (pdf)

N30. Acousto-optic imaging: Merging the best of two worlds, by G. Lerosey and M. Fink; Nature Photonics - News and Views, 7 (4), pp. 265–267. March 2013. (article link) (pdf)

N29. Surgery WITHOUT Cutting the Skin, by Dave Malkoff, KTLA Television News Reporter (@Malkoff & @KTLA). June 2012. (KTLA-TV Video Link) .

N28. Seeing Inside Tissue, by Marcus Woo. Caltech Media Relations, June 2012.

N27. High-tech Petri dishes, by Erika Pastrana. Published online Nature Methods 8 (999), Nov 2011. doi:10.1038/nmeth.1786 (article link) (pdf)

N26. Feature of the Week 5/01/11: Caltech Researchers Develop an OCT Needle Probe for Investigating Open Angle Glaucoma, by Eric Swanson, Optical Coherence Tomography News (May 1, 2011). (article link)

N25. Imaging: Phase sensor on a chip, by Oliver Graydon, Nature Photonics, Vol 4, pg 668, (2010) doi:10.1038/nphoton.2010.225 (article link)

N24. Feature of the Week 2/7/10: Manual-Scanning Optical Coherence Tomography (OCT) Probe Based on Position Tracking, by Eric Swanson, Optical Coherence Tomography News (Feb 6 2010). (article link)

N23. The most transparent research, by Melinda Wenner, Nature Medicine 15, 1106 - 1109 (2009), doi:10.1038/nm1009-1106. (article link) (pdf)

N22. Microscopic marvels: Microscope for the masses, by Erika Check Hayden, Nature Vol 459, June 4, 2009, pp. 632-633. (article link) (pdf)

N21. A Toymaker's Lab, by Marcus Y. Woo. Engineering & Science, Spring 2009, pp. 22-27. (pdf)

N20. The $10 Microscope, by Taylor Buley. 2009, LLC. (article link)

N19. Optofluidics: Optofluidics Enhances Cytometry, by Changhuei Yang, David Erickson, and Demetri Psaltis, Bio Optics World, January 2009.

N18. Microscope-On-a-Chip Is One Step Closer to the Tricorder, by Dave Bullock. WIRED, October 13, 2008. (article link)

N17. Mini-Microscope Could Lead to Cell-Sorting Implants, by Alexis Madriga. WIRED, July 28, 2008. (article link)

N16. New Micro-Microscope Is Portable And Cheap, National Public Radio Interview: Talk of the Nation, August 2008. (article link)

N15. Microscope-on-a-Chip Is Small in Size, Big in Scope, by Shana Leonard. Medical Product Manufacturing News, October 2008. (pdf)

N14. Caltech Bioengineers Develop "Microscope on a Chip," by Kathy Svitil. Caltech Media Relations, July 2008.

N13. Bringing Microscopes Down to Size in Quest for More Compact Labs, by Henry Fountain. New York Times, July 2008. (article link)

N12. Lensless On-Chip Microscope Inspired by "Floaters" in the Eye, by J. R. Minkel. Scientific American, July 2008. (article link)

N11. Tiny $10 Microscope -- A high-resolution, lens-free microscope fits on a dime-size chip, by Katherine Bourzac. Technology Review, June 2008.

N10. Optofluidics Emerges from the Laboratory, by David Erickson, Cornell University, Changhuei Yang, California Institute of Technology, and Demetri Psaltis, Ecole Polytechnique Federale de Lausanne. Photonics Spectra, February 2008, pp. 74-79. (pdf)

N9. Gaining High Resolution with Nanoaperture Grid, by Hank Hogan. Photonics Spectra, February 2008, pp. 103. (pdf)

N8. Getting in Deeper, by Hank Hogan. Biophotonics, July 2008, pp. 25. (pdf)

N7. Building a Microscopic Microscope, by Changhuei Yang and Demetri Psaltis. EAS ENGenious - Progress Report, Spring 2007, pp.44-47. (pdf)

N6. PARS-OCT Endoscopy System, by Marinko Sarunic, Shuo Han, Jigang Wu, Zahid Yaqoob, Changhuei Yang.

N5. Gradient Index Optical Microsystems Visualize Living Cells in Deep Tissue, by Dr. Bernhard Messerschmidt, Grintech GmbH. Biophotonics International, September 2007, pp. 36-38. (pdf)

N4. Caltech Researchers Announce Invention of the Optofluidic Microscope, Caltech Media Relations, September 5, 2006.

N3. Optofluidics Reinvents the Microscope, by Changhuei Yang, Xin Heng and Demetri Psaltis. Laser Focus World Vol 42 (12), December 2006, pp. 83-86. (pdf)

N2. Optofluidics can create small, cheap biophotonic devices, by Changhuei Yang and Demetri Psaltis. Laser Focus World Vol 42 (6), July 2006, pp. 85-88. (pdf)

N1. Optofluidic Microscope Enables Lensless Imaging of Microorganisms, Biophotonics International Vol 13 (10), October 2006, pp. 24. (link) (pdf)

Pre-Group Publications

P27. Kyungwon An, Changhuei Yang, Ramachandra R. Dasari, and Michael S. Feld, Cavity ring-down technique and its application to measurement of ultraslow velocities, Optics Letters 20, 1068; 1995; PMID: 19859426 [PubMed] (article link) (pdf)

P26. Changhuei Yang, and Kyungwon An, Quantum trajectory analysis of a thresholdlike transition in the microlaser, Physical Review A 55, 4492; 1997 (article link) (pdf)

P25. Changhuei Yang, Kyungwon An, Lev T. Perelman, Ramachandra R. Dasari, and Michael S. Feld, Spatial coherence of forward-scattered light in a turbid medium, Journal of the Optical Society of America A 16, 866; 1999; PMID: 10192961 [PubMed] (article link) (pdf)

P24. Changhuei Yang, Kyungwon An, Lev T. Perelman, Adam Wax, Ramachandra R. Dasari, and Michael S. Feld, Feasibility of field-based light scattering spectroscopy, Journal of Biomedical Optics 5, 138; 2000; PMID: 10938777 [PubMed] (article link) (pdf)

P23. Changhuei Yang, Adam Wax, Irene Georgakoudi, Eugene B. Hanlon, Kamran Badizadegan, Ramachandra R. Dasari, Michael S. Feld, Interferometric phase-dispersion microscopy, Optics Letters 25, 1526; 2000; PMID: 18066267 [PubMed] (article link) (pdf)

P22. Changhuei Yang, Adam Wax, Michael S. Feld, Measurement of the anomalous phase velocity of ballistic light in a random medium using a novel interferometer, Optics Letters 26, 235; 2001; PMID: 18033558 [PubMed] (article link) (pdf)

P21. Changhuei Yang, Adam Wax, Ramachandra R. Dasari, Michael S. Feld, Phase-dispersion optical tomography, Optics Letters 26, 686; 2001; PMID: 18040420 [PubMed] (article link) (pdf)

P20. Changhuei Yang, Adam Wax, Mariah S. Hahn, Kamran Badizadegan, Ramachandra R. Dasari, Michael S. Feld, Phase-referenced interferometer with subwavelength and subhertz sensitivity applied to the study of cell membrane dynamics, Optics Letters 26, 1271; 2001; PMID: 18049583 [PubMed] (article link) (pdf)

P19. Adam Wax, Changhuei Yang, Ramachandra R. Dasari, Michael S. Feld, Measurement of angular distributions using low-coherence interferometry for lightscattering spectroscopy, Optics Letters 26, 322; 2001 (article link) (pdf)

P18. Adam Wax, Changhuei Yang, Ramachandra R. Dasari, Michael S. Feld, Path-length-resolved dynamic light scattering: modeling the transition from single to diffusive scattering, Applied Optics 40, 4222; 2001; PMID: 18360459 [PubMed] (article link) (pdf)

P 17. Changhuei Yang, Adam Wax, Ramachandra R. Dasari, Michael S. Feld, 2π ambiguity-free optical depth ranging with sub-nanometer precision using a novel phase-crossing low coherence interferometer, Optics Letters 27 (2), 77; 2002; PMID: 18007717 [PubMed] (article link) (pdf)

P 16. Adam Wax, Changhuei Yang, Vadim Backman, Maxim Kalashnikov, Ramachandra R. Dasari, and Michael S. Feld, Determination of particle size using the angular distribution of backscattered light as measured with low-coherence interferometry, Journal of the Optical Society of America A 19 (4), 737; 2002; PMID: 11934166 [PubMed] (article link) (pdf)

P15. Adam Wax, Changhuei Yang, Vadim Backman, Kamran Badizadegan, Charles W. Boone, Ramachandra R. Dasari, Michael S. Feld, Cellular organization and sub-structure measured using angle-resolved low coherence interferometry, Biophysical Journal 82 (4), 2256; 2002; PMID: 11916880 [PubMed]; PMCID: PMC1302018 (article link) (pdf)

P14. Changhuei Yang, Jerome Mertz, Transmission confocal laser scanning microscopy with a virtual pinhole based on nonlinear detection, Optics Letters 28, 224; 2003; PMID: 12661526 [PubMed] (article link) (pdf)

P13. Adam Wax, Changhuei Yang, Markus G. Müller, Ronald Nines, Charles W. Boone, Vernon E. Steele, Gary D. Stoner, Ramachandra R. Dasari and Michael S. Feld, In Situ detection of neoplastic transformation and chemopreventive effects in rat esophagus epithelium using angle-resolved low-coherence interferometry, Cancer Research 63 (13), 3556; 2003; PMID: 12839941 [PubMed] (article link) (pdf)

P12. Adam Wax, Changhuei Yang, and Joseph Izatt, Fourier-domain low coherence interferometry for light-scattering spectroscopy, Optics Letters 28 (14), 1230; 2003; PMID: 12885030 [PubMed] (article link) (pdf)

P11. Michael Choma, Marinko Sarunic, Changhuei Yang, Joseph Izatt, Sensitivity advantage of swept source and Fourier domain optical coherence tomography, Optics Express 11 (18), 2183; 2003; PMID: 19466106 [PubMed] (article link) (pdf)

P10. Michael Choma, Changhuei Yang, Joseph Izatt, Instantaneous quadrature low-coherence interferometry with 3x3 fiber-optic couplers, Optics Letters 28 (22), 2162; 2003; PMID: 14649928 [PubMed] (article link) (pdf)

P9. Changhuei Yang, Siavash Yazdanfar, Joseph Izatt, Amplification of optical delay by use of matched linearly chirped fiber Bragg gratings, Optics Letters 29 (7), 685; 2004; PMID: 15072358 [PubMed - indexed for MEDLINE] (article link) (pdf)

P8. Changhuei Yang, Michael Choma, Laura Lamb, John Simon, Joseph Izatt, Protein based molecular contrast OCT with phytochrome as the contrast agent, Optics Letters 29 (12), 1396; 2004; PMID: 15233447 [PubMed] (article link) (pdf)

P7. Changhuei Yang, Michael Choma, Brian Applegate, John Simon, Joseph Izatt, Spectral triangulation molecular contrast OCT with indocyanine green as the contrast agent, Optics Letters 29 (17), 2016; 2004; PMID: 15455765 [PubMed]; PMCID: PMC1283115 (article link) (pdf)

P6. Brian Applegate, Changhuei Yang, Andrew Rollins, Joseph Izatt, Polarization resolved second harmonic generation optical coherence tomography in collagen, Optics Letters 29 (19), 2252; 2004; PMID: 15524371 [PubMed] (article link) (pdf)

P5. Marinko V. Sarunic, Michael A. Choma, Changhuei Yang, Joseph A. Izatt, Instantaneous complex spectral domain OCT using 3x3 fiber couplers, Optics Express 13 (3), 957-67; 2005; PMID: 19494959 [PubMed] (article link) (pdf)

P4. Siavash Yazdanfar, Changhuei Yang, Marinko V. Sarunic, Joseph A. Izatt, Frequency estimation precision in Doppler optical coherence tomography using the Cramer-Rao lower bound, Optics Express 13 (2), 410-6; 2005; PMID: 19488367 [PubMed] (article link) (pdf)

P3. Andrew Ahn, Changhuei Yang, Adam Wax, Gabriel Popescu, Chris Fang-Yen, Kamran Badizadegan, Ramachandra Dasari, Michael Feld, Harmonic phase-dispersion microscope with a Mach-Zehnder interferometer, Applied Optics 44 (7), 1188-90; 2005; PMID: 15765698 [PubMed] (article link) (pdf)

P2. Brian E. Applegate, Changhuei Yang, Joseph A. Izatt, Theoretical comparison of the sensitivity of molecular contrast optical coherence tomography techniques, Optics Express 13 (20), 8146-63; 2005; PMID: 19498844 [PubMed] (article link) (pdf)

P1. Michael. A. Choma, Audrey K. Ellerbee, Changhuei Yang, Joseph A. Izatt, Spectral-domain phase microscopy, Optics Letters 30 (10), 1162-64; 2005; PMID: 15945141 [PubMed - indexed for MEDLINE] (article link) (pdf)